MA_9544285g0010 (AGL42)

Aliases : AGL42

Description : no hits & (original description: none)

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_9544285g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00218870	ANR1, AGL44,...	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
AMTR_s00025p00244880	AGL61, DIA,...	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
AMTR_s00140p00045380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
AT1G26310	AGL10, CAL1, CAL	K-box region and MADS-box transcription factor family protein	0.03	OrthoFinder output from all 47 species
AT2G34440	AGL29	AGAMOUS-like 29	0.03	OrthoFinder output from all 47 species
AT4G11880	AGL14	AGAMOUS-like 14	0.03	OrthoFinder output from all 47 species
AT5G15800	AGL2, SEP1	K-box region and MADS-box transcription factor family protein	0.06	OrthoFinder output from all 47 species
Aev_g08908	AGL16	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g09257	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g13176	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g14204	AGL18	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene13944.t1	AGL18, Aspi01Gene13944	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene17806.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene17808.t1	AGL21, Aspi01Gene17808	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene17818.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene17819.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene17826.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19451.t1	SOC1, AGL20,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19457.t1	AGL16, Aspi01Gene19457	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene49757.t1	GL19, AGL19,...	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene54037.t3	Aspi01Gene54037	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0009.g011788	XAL1, AGL12	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g16031	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.08G048600.1	AGL10, CAL1,...	not classified & original description: pacid=50638045...	0.05	OrthoFinder output from all 47 species
Ceric.12G052800.1	GL19, AGL19,...	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.37G052700.1	AGL104, Ceric.37G052700	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g33443	AGL16	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g43724	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g25491	AGL8, FUL	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07325	AGL8, FUL	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g27385	AGL21	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01003864001	AGL16	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
GSVIVT01006592001	AGL61, DIA	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01014093001	No alias	RNA biosynthesis.transcriptional activation.MADS box...	0.06	OrthoFinder output from all 47 species
GSVIVT01022182001	AGL104	RNA biosynthesis.transcriptional activation.MADS box...	0.04	OrthoFinder output from all 47 species
Gb_03068	AGL16	transcription factor (MADS/AGL)	0.05	OrthoFinder output from all 47 species
LOC_Os02g07430.1	AGL32, TT16,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os04g52410.2	AGL32, TT16,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os05g11414.1	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os06g11970.1	AGL66, LOC_Os06g11970	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os06g23980.1	AGL16, LOC_Os06g23980	MADS-box transcription factor 27 OS=Oryza sativa subsp....	0.04	OrthoFinder output from all 47 species
LOC_Os09g32948.1	AGL9, SEP3,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os11g43740.1	AGL65, LOC_Os11g43740	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os12g31748.2	AGL8, FUL, LOC_Os12g31748	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Len_g48343	AGL16	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g48344	AGL21	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g23025	AGL21	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_2986g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_75656g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Nbi_g11366	AGL3, SEP4	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g41762	AGL16	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g21068	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g04968	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13078	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g28969	AGL104	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60433	AGL21	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g62341	ANR1, AGL44	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002217	AGL15	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003069	No alias	not classified & original description: CDS=1-255	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003070	AGL14	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009704	ANR1, AGL44	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012202	No alias	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018504	AGL42	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Smo121275	AGL7, AP1	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
Solyc01g106710.1.1	AGL62, Solyc01g106710	component MED19 of head module of MEDIATOR transcription...	0.04	OrthoFinder output from all 47 species
Solyc04g005320.3.1	AGL2, SEP1,...	transcription factor (MADS/AGL)	0.06	OrthoFinder output from all 47 species
Solyc06g059970.4.1	PI, Solyc06g059970	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc06g150109.1.1	SOC1, AGL20,...	MADS-box protein AGL42 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc10g017630.3.1	SOC1, AGL20,...	MADS-box protein SOC1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc10g017640.1.1	GL19, AGL19,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc12g056460.3.1	SOC1, AGL20,...	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Spa_g02544	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g29118	AGL21	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g31312	AGL2, SEP1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55783	GL19, AGL19	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g11248	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g23921	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g27845	GL19, AGL19	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e018993_P001	AGL62, Zm00001e018993	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Zm00001e030373_P001	AGL10, CAL1,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	1	32

External Links

No external refs found!

MA_9544285g0010 (AGL42)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation