Aliases : SRCAP, PIE1, chr13
Description : Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana (sp|q7x9v2|pie1_arath : 152.0)
Gene families : OG0002986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002986_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00085p00089520 | SRCAP, PIE1,... | Chromatin organisation.chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
AT3G12810 | SRCAP, PIE1, chr13 | SNF2 domain-containing protein / helicase... | 0.11 | OrthoFinder output from all 47 species | |
Adi_g086891 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g17049 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
Ala_g21115 | SRCAP, PIE1, chr13 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Als_g04504 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.09 | OrthoFinder output from all 47 species | |
Als_g11978 | SRCAP, PIE1, chr13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g13991 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene00837.t1 | SRCAP, PIE1,... | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0329.g065325 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.22G011100.1 | SRCAP, PIE1,... | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.11 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000194.26 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.02 | OrthoFinder output from all 47 species | |
Cre14.g618860 | SRCAP, PIE1, chr13 | Chromatin organisation.chromatin remodeling... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g08326 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01033511001 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.08 | OrthoFinder output from all 47 species | |
Gb_04358 | SRCAP, PIE1, chr13 | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g46450.2 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.06 | OrthoFinder output from all 47 species | |
MA_424432g0010 | SRCAP, PIE1, chr13 | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.1 | OrthoFinder output from all 47 species | |
MA_64269g0010 | SRCAP, PIE1, chr13 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.05 | OrthoFinder output from all 47 species | |
Mp7g15670.1 | SRCAP, PIE1, chr13 | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.06 | OrthoFinder output from all 47 species | |
Msp_g15065 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g13998 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g11854 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g56964 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g11626 | No alias | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g063210.3.1 | SRCAP, PIE1,... | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g063220.2.1 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.1 | OrthoFinder output from all 47 species | |
Spa_g09110 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g20443 | SRCAP, PIE1, chr13 | ATPase component *(PIE1) of SWR1 chromaTin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015483_P001 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.12 | OrthoFinder output from all 47 species | |
Zm00001e023267_P001 | SRCAP, PIE1,... | ATPase component PIE1 of SWR1 chromatin remodeling complex | 0.11 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |