MA_931259g0010


Description : pectin methylesterase


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_931259g0010
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00007p00101250 ATPMEPCRA,... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
AMTR_s00033p00227850 evm_27.TU.AmTr_v1... Probable pectinesterase/pectinesterase inhibitor 21... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00031200 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00047530 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00074780 PME61,... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AT1G11580 ATPMEPCRA, PMEPCRA methylesterase PCR A 0.06 OrthoFinder output from all 47 species
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.03 OrthoFinder output from all 47 species
AT2G26450 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT3G10710 RHS12 root hair specific 12 0.04 OrthoFinder output from all 47 species
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 OrthoFinder output from all 47 species
AT3G59010 PME61 pectin methylesterase 61 0.06 OrthoFinder output from all 47 species
AT3G60730 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G49180 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.06 OrthoFinder output from all 47 species
Aev_g20237 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aev_g38992 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Als_g07171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15045 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Als_g52485 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19937 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aop_g07772 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05823.t1 Aspi01Gene05823 EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene07383.t1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07398.t1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10964.t1 Aspi01Gene10964 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11209.t1 Aspi01Gene11209 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45157.t1 ATPME2, PME2,... EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0022.g015989 PME44, ATPME44 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0205.g057775 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0205.g057784 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s1989.g108563 No alias pectin methylesterase & original description: CDS=1-588 0.02 OrthoFinder output from all 47 species
Ceric.01G014700.1 Ceric.01G014700 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.01G014900.1 Ceric.01G014900 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.19G056000.1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G008400.1 ATPME2, PME2,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016400.1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g13438 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Dac_g21852 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g38611 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g44370 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Dcu_g01562 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Dcu_g11844 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Dcu_g12104 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g13634 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g14056 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g41291 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dde_g08691 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g48560 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ehy_g02809 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08496 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Ehy_g09100 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g09868 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ehy_g15129 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g26672 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Ehy_g27713 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011699001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01015000001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.07 OrthoFinder output from all 47 species
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.07 OrthoFinder output from all 47 species
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01028265001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_01422 ATPME3, PME3 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_03174 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_06354 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_10522 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_10523 ATPME3, PME3 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_18512 ATPME3, PME3 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Gb_21388 ATPMEPCRF, PMEPCRF pectin methylesterase 0.1 OrthoFinder output from all 47 species
Gb_24214 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_24564 ATPME3, PME3 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Gb_25439 ATPMEPCRF, PMEPCRF pectin methylesterase 0.05 OrthoFinder output from all 47 species
Gb_28387 ATPME3, PME3 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Gb_35881 ATPMEPCRF, PMEPCRF pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os01g21034.1 ATPME3, PME3,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os01g65790.1 LOC_Os01g65790 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os02g54190.1 PME61, LOC_Os02g54190 pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os05g29790.1 ATPMEPCRB, LOC_Os05g29790 pectin methylesterase 0.08 OrthoFinder output from all 47 species
LOC_Os06g09340.1 LOC_Os06g09340 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os07g47830.1 ATPME3, PME3,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os08g34900.1 LOC_Os08g34900 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os11g07090.1 LOC_Os11g07090 pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os11g08750.1 LOC_Os11g08750 pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os11g36240.1 LOC_Os11g36240 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Len_g13757 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
MA_10435891g0010 PME61 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_130858g0010 ATPMEPCRF, PMEPCRF pectin methylesterase 0.05 OrthoFinder output from all 47 species
MA_158002g0020 ATPMEPCRF, PMEPCRF pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_18093g0010 ATPMEPCRA, PMEPCRA Pectinesterase 2.1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
MA_648837g0010 ATPMEPCRF, PMEPCRF pectin methylesterase 0.06 OrthoFinder output from all 47 species
MA_74624g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_84680g0010 ATPME2, PME2 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_86577g0010 ATPMEPCRB pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_8928694g0010 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.05 OrthoFinder output from all 47 species
MA_96515g0010 ATPMEPCRB pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp8g00060.1 ATPME2, PME2 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp8g09330.1 RHS12 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Msp_g16008 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Msp_g25874 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Nbi_g08831 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g20165 No alias EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Ore_g22612 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ore_g26987 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g32251 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pir_g18600 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Pir_g22505 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Pnu_g06076 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Pnu_g32280 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Pp3c2_35260V3.1 ATPME3, PME3, Pp3c2_35260 pectin methylesterase 3 0.02 OrthoFinder output from all 47 species
Pp3c8_3840V3.1 Pp3c8_3840 Plant invertase/pectin methylesterase inhibitor superfamily 0.05 OrthoFinder output from all 47 species
Ppi_g12664 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013432 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018433 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0255.g026821 No alias not classified & original description: CDS=300-1226 0.02 OrthoFinder output from all 47 species
Smo114014 ATPMEPCRF, PMEPCRF Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Smo266995 ATPME2, PME2 Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Smo83744 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc01g091050.4.1 Solyc01g091050 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc01g099950.1.1 Solyc01g099950 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc02g014300.2.1 Solyc02g014300 pectin methylesterase 0.06 OrthoFinder output from all 47 species
Solyc02g081990.3.1 Solyc02g081990 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc03g083840.3.1 Solyc03g083840 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc03g083870.4.1 Solyc03g083870 pectin methylesterase 0.06 OrthoFinder output from all 47 species
Solyc03g123620.4.1 PME1, ATPME1,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc05g054360.4.1 Solyc05g054360 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc07g064190.3.1 ATPMEPCRA,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Spa_g06048 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Spa_g18353 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Spa_g42089 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Tin_g02036 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acTing on ester bond & original... 0.02 OrthoFinder output from all 47 species
Tin_g14828 No alias EC_3.1 hydrolase acTing on ester bond & original... 0.02 OrthoFinder output from all 47 species
Tin_g15341 ATPME2, PME2 EC_3.1 hydrolase acTing on ester bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e009863_P001 Zm00001e009863 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e011069_P001 PME61, Zm00001e011069 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e017514_P001 ATPMEPCRB, Zm00001e017514 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e017515_P001 ATPME2, PME2,... pectin methylesterase 0.08 OrthoFinder output from all 47 species
Zm00001e026790_P001 ATPMEPCRB, Zm00001e026790 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e034231_P001 Zm00001e034231 pectin methylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 83 379
No external refs found!