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  5. MA_929730g0010

MA_929730g0010


Description : cell cycle replicated DNA checkpoint protein (TopBP1)


Gene families : OG0008047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_929730g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00057240 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA... 0.1 OrthoFinder output from all 47 species
AT4G02110 No alias transcription coactivators 0.03 OrthoFinder output from all 47 species
Aspi01Gene28810.t1 Aspi01Gene28810 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036351 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.06 OrthoFinder output from all 47 species
Ceric.15G070200.1 Ceric.15G070200 cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.22 OrthoFinder output from all 47 species
Cre03.g158464 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028102001 No alias Cell cycle.interphase.DNA... 0.16 OrthoFinder output from all 47 species
Gb_07881 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.18 OrthoFinder output from all 47 species
Gb_07883 No alias BRCT domain-containing protein At4g02110 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_39610 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.18 OrthoFinder output from all 47 species
Gb_39611 No alias no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
LOC_Os03g19190.1 LOC_Os03g19190 cell cycle replicated DNA checkpoint protein (TopBP1) 0.07 OrthoFinder output from all 47 species
Mp5g23040.1 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.17 OrthoFinder output from all 47 species
Nbi_g08424 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.02 OrthoFinder output from all 47 species
Spa_g06915 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.09 OrthoFinder output from all 47 species
Tin_g13316 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.1 OrthoFinder output from all 47 species
Zm00001e001412_P002 Zm00001e001412 cell cycle replicated DNA checkpoint protein (TopBP1) 0.08 OrthoFinder output from all 47 species
Zm00001e035929_P001 Zm00001e035929 cell cycle replicated DNA checkpoint protein (TopBP1) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 76 137
IPR019787 Znf_PHD-finger 328 379
No external refs found!