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Aliases : QRT3
Description : polygalacturonase (QRT3)
Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_917578g0010 | |
| Cluster | HCCA: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00255270 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00319p00013650 | QRT3,... | Polygalacturonase QRT3 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s03255p00000400 | QRT3,... | Cell wall.pectin.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s05553p00004300 | QRT3,... | Cell wall.pectin.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G20050 | QRT3 | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g67503 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34070.t1 | QRT3, Aspi01Gene34070 | polygalacturonase *(QRT3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010377 | QRT3 | polygalacturonase *(QRT3) & original description: CDS=62-1624 | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g53005 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G061400.1 | QRT3, Ceric.15G061400 | polygalacturonase *(QRT3) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.21G028400.1 | QRT3, Ceric.21G028400 | polygalacturonase *(QRT3) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16097 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g12020 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g31759 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01012138001 | No alias | Cell wall.pectin.modification and... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01012139001 | QRT3 | Cell wall.pectin.modification and... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01029528001 | QRT3 | Cell wall.pectin.modification and... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g58007 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_10425986g0020 | QRT3 | polygalacturonase (QRT3) | 0.04 | OrthoFinder output from all 47 species | |
| MA_8818361g0010 | QRT3 | polygalacturonase (QRT3) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g12922 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g44003 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g29972 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g26325 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g40884 | No alias | polygalacturonase *(QRT3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g068400.3.1 | QRT3, Solyc02g068400 | polygalacturonase (QRT3) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g33866 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g38130 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44469 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e006958_P005 | QRT3, Zm00001e006958 | polygalacturonase (QRT3) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004144 | diacylglycerol O-acyltransferase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
| MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016411 | acylglycerol O-acyltransferase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |