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  5. MA_8962229g0010

MA_8962229g0010 (ARP)


Aliases : ARP

Description : AP-endonuclease (ARP)


Gene families : OG0005265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_8962229g0010
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.113 ARP DNA damage response.DNA repair mechanisms.base excision... 0.01 OrthoFinder output from all 47 species
Ehy_g14359 ARP EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g58680.1 ARP, LOC_Os01g58680 AP-endonuclease (ARP) 0.06 OrthoFinder output from all 47 species
Sam_g13111 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 74 153
No external refs found!