Coexpression cluster: Cluster_79 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006259 DNA metabolic process 8.09% (11/136) 5.07 0.0 0.0
GO:0090304 nucleic acid metabolic process 8.82% (12/136) 3.48 0.0 0.0
GO:0140657 ATP-dependent activity 6.62% (9/136) 4.19 0.0 0.0
GO:0051276 chromosome organization 3.68% (5/136) 6.35 0.0 0.0
GO:0003677 DNA binding 10.29% (14/136) 2.85 0.0 0.0
GO:0006260 DNA replication 3.68% (5/136) 5.97 0.0 0.0
GO:0008017 microtubule binding 4.41% (6/136) 5.13 0.0 1e-06
GO:0006139 nucleobase-containing compound metabolic process 8.82% (12/136) 3.06 0.0 1e-06
GO:0015631 tubulin binding 4.41% (6/136) 4.98 0.0 1e-06
GO:0046483 heterocycle metabolic process 8.82% (12/136) 2.9 0.0 1e-06
GO:0005524 ATP binding 13.24% (18/136) 2.18 0.0 2e-06
GO:0006725 cellular aromatic compound metabolic process 8.82% (12/136) 2.85 0.0 2e-06
GO:0008092 cytoskeletal protein binding 4.41% (6/136) 4.66 0.0 2e-06
GO:0006996 organelle organization 3.68% (5/136) 5.19 0.0 3e-06
GO:0008094 ATP-dependent activity, acting on DNA 2.94% (4/136) 6.18 0.0 3e-06
GO:0007018 microtubule-based movement 3.68% (5/136) 5.21 0.0 3e-06
GO:0003777 microtubule motor activity 3.68% (5/136) 5.21 0.0 3e-06
GO:1901360 organic cyclic compound metabolic process 8.82% (12/136) 2.77 0.0 3e-06
GO:0044260 cellular macromolecule metabolic process 8.09% (11/136) 2.88 0.0 3e-06
GO:0007017 microtubule-based process 3.68% (5/136) 4.99 1e-06 5e-06
GO:1903047 mitotic cell cycle process 2.21% (3/136) 7.35 1e-06 5e-06
GO:0035639 purine ribonucleoside triphosphate binding 13.24% (18/136) 1.99 1e-06 5e-06
GO:0003774 cytoskeletal motor activity 3.68% (5/136) 4.92 1e-06 5e-06
GO:0006281 DNA repair 3.68% (5/136) 4.82 1e-06 7e-06
GO:0051716 cellular response to stimulus 3.68% (5/136) 4.67 2e-06 1e-05
GO:0033554 cellular response to stress 3.68% (5/136) 4.67 2e-06 1e-05
GO:0006974 cellular response to DNA damage stimulus 3.68% (5/136) 4.67 2e-06 1e-05
GO:0003676 nucleic acid binding 11.76% (16/136) 2.05 2e-06 1.1e-05
GO:0034641 cellular nitrogen compound metabolic process 8.82% (12/136) 2.47 2e-06 1.1e-05
GO:1901265 nucleoside phosphate binding 14.71% (20/136) 1.71 3e-06 1.6e-05
GO:0000166 nucleotide binding 14.71% (20/136) 1.71 3e-06 1.6e-05
GO:0032559 adenyl ribonucleotide binding 13.24% (18/136) 1.83 3e-06 1.7e-05
GO:0043138 3'-5' DNA helicase activity 1.47% (2/136) 8.94 4e-06 2e-05
GO:0030554 adenyl nucleotide binding 13.24% (18/136) 1.78 5e-06 2.5e-05
GO:0022402 cell cycle process 2.21% (3/136) 6.43 6e-06 2.5e-05
GO:0036094 small molecule binding 14.71% (20/136) 1.64 6e-06 2.8e-05
GO:0030983 mismatched DNA binding 2.21% (3/136) 6.27 8e-06 3.3e-05
GO:0006298 mismatch repair 2.21% (3/136) 6.27 8e-06 3.3e-05
GO:0140097 catalytic activity, acting on DNA 2.94% (4/136) 4.96 9e-06 3.7e-05
GO:0008608 attachment of spindle microtubules to kinetochore 1.47% (2/136) 8.35 1.2e-05 4.8e-05
GO:0051315 attachment of mitotic spindle microtubules to kinetochore 1.47% (2/136) 8.35 1.2e-05 4.8e-05
GO:0032555 purine ribonucleotide binding 13.24% (18/136) 1.68 1.3e-05 5e-05
GO:0032553 ribonucleotide binding 13.24% (18/136) 1.67 1.6e-05 5.7e-05
GO:0097367 carbohydrate derivative binding 13.24% (18/136) 1.66 1.7e-05 6.2e-05
GO:0017076 purine nucleotide binding 13.24% (18/136) 1.64 2e-05 7.1e-05
GO:0031262 Ndc80 complex 1.47% (2/136) 7.94 2.5e-05 8.6e-05
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 1.47% (2/136) 7.61 4.1e-05 0.000136
GO:0004055 argininosuccinate synthase activity 1.47% (2/136) 7.61 4.1e-05 0.000136
GO:0043168 anion binding 13.24% (18/136) 1.54 4.9e-05 0.00016
GO:1901363 heterocyclic compound binding 19.12% (26/136) 1.17 7.5e-05 0.000235
GO:0097159 organic cyclic compound binding 19.12% (26/136) 1.17 7.5e-05 0.000235
GO:0005694 chromosome 1.47% (2/136) 7.13 8.6e-05 0.000254
GO:0006526 arginine biosynthetic process 1.47% (2/136) 7.13 8.6e-05 0.000254
GO:0006525 arginine metabolic process 1.47% (2/136) 7.13 8.6e-05 0.000254
GO:0016043 cellular component organization 4.41% (6/136) 3.06 9.3e-05 0.00027
GO:0071840 cellular component organization or biogenesis 4.41% (6/136) 3.0 0.000115 0.000328
GO:0009987 cellular process 18.38% (25/136) 1.14 0.000137 0.000383
GO:0071103 DNA conformation change 1.47% (2/136) 6.24 0.000318 0.000842
GO:0006265 DNA topological change 1.47% (2/136) 6.24 0.000318 0.000842
GO:0003916 DNA topoisomerase activity 1.47% (2/136) 6.24 0.000318 0.000842
GO:0009064 glutamine family amino acid metabolic process 1.47% (2/136) 6.13 0.00037 0.00095
GO:0009084 glutamine family amino acid biosynthetic process 1.47% (2/136) 6.13 0.00037 0.00095
GO:0003678 DNA helicase activity 1.47% (2/136) 5.61 0.000767 0.001936
GO:0006269 DNA replication, synthesis of RNA primer 0.74% (1/136) 8.94 0.002041 0.005071
GO:0006950 response to stress 3.68% (5/136) 2.47 0.002199 0.005378
GO:0003690 double-stranded DNA binding 2.21% (3/136) 3.49 0.002516 0.006062
GO:0004386 helicase activity 1.47% (2/136) 4.51 0.003535 0.008389
GO:0016879 ligase activity, forming carbon-nitrogen bonds 1.47% (2/136) 4.35 0.004386 0.010257
GO:0140640 catalytic activity, acting on a nucleic acid 2.94% (4/136) 2.51 0.00558 0.012857
GO:0030261 chromosome condensation 0.74% (1/136) 7.35 0.006111 0.01313
GO:0007076 mitotic chromosome condensation 0.74% (1/136) 7.35 0.006111 0.01313
GO:0000796 condensin complex 0.74% (1/136) 7.35 0.006111 0.01313
GO:0005664 nuclear origin of replication recognition complex 0.74% (1/136) 7.35 0.006111 0.01313
GO:0043167 ion binding 13.97% (19/136) 0.91 0.005941 0.013494
GO:1901607 alpha-amino acid biosynthetic process 1.47% (2/136) 3.89 0.008144 0.017038
GO:0000808 origin recognition complex 0.74% (1/136) 6.94 0.008139 0.017256
GO:0050896 response to stimulus 3.68% (5/136) 1.99 0.009001 0.018586
GO:0006275 regulation of DNA replication 0.74% (1/136) 6.61 0.010164 0.020719
GO:0044237 cellular metabolic process 10.29% (14/136) 0.99 0.01138 0.022903
GO:0051052 regulation of DNA metabolic process 0.74% (1/136) 6.35 0.012184 0.024217
GO:0008652 amino acid biosynthetic process 1.47% (2/136) 3.58 0.012344 0.024231
GO:0006807 nitrogen compound metabolic process 10.29% (14/136) 0.96 0.013269 0.025729
GO:1901605 alpha-amino acid metabolic process 1.47% (2/136) 3.35 0.016638 0.031873
GO:0008150 biological_process 19.85% (27/136) 0.6 0.017969 0.034012
GO:0005488 binding 21.32% (29/136) 0.57 0.018437 0.034487
GO:0006270 DNA replication initiation 0.74% (1/136) 5.48 0.022226 0.041092
GO:0043229 intracellular organelle 2.94% (4/136) 1.86 0.025189 0.045512
GO:0043226 organelle 2.94% (4/136) 1.86 0.025189 0.045512
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Azolla filiculoides HCCA Cluster_2 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_6 0.019 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_19 0.026 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_54 0.036 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_78 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_50 0.101 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_18 0.045 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_50 0.084 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_10 0.025 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_21 0.02 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_26 0.023 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_36 0.019 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_52 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_59 0.025 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_63 0.021 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_142 0.021 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_147 0.031 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_34 0.025 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_38 0.064 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_97 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_100 0.101 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_19 0.073 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_59 0.031 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_91 0.034 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_18 0.09 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_53 0.099 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_130 0.038 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_18 0.042 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_32 0.037 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_11 0.067 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_51 0.055 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_141 0.02 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_7 0.05 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_154 0.047 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_66 0.04 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_99 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_144 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_9 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_109 0.089 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_20 0.11 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_34 0.04 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_17 0.083 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_25 0.018 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_143 0.053 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_78 0.035 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_101 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_27 0.098 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_80 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_83 0.101 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_170 0.02 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_22 0.028 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_130 0.02 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_173 0.028 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_232 0.026 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_132 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_25 0.028 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_26 0.023 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_11 0.037 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_19 0.039 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_20 0.019 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_22 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_21 0.05 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_22 0.08 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_53 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_31 0.051 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_42 0.03 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_56 0.02 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_87 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_9 0.045 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_14 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_138 0.023 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_146 0.062 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_37 0.119 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_45 0.02 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_158 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_65 0.058 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_85 0.064 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_15 0.117 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_119 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_167 0.02 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_85 0.13 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_120 0.026 OrthoFinder output from all 47 species Compare
Sequences (136) (download table)

InterPro Domains

GO Terms

Family Terms