MA_8861g0010


Description : no hits & (original description: none)


Gene families : OG0001642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001642_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_8861g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g012494 ESP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016024 CSTF64 component *(CstF64/Rna15) of Cleavage Stimulatory Factor... 0.02 OrthoFinder output from all 47 species
Adi_g104795 CSTF64 component *(CstF64/Rna15) of Cleavage Stimulatory Factor... 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g059945 CSTF64 component *(CstF64/Rna15) of Cleavage Stimulatory Factor... 0.04 OrthoFinder output from all 47 species
GSVIVT01013670001 CSTF64 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.02 OrthoFinder output from all 47 species
LOC_Os11g07490.1 CSTF64, LOC_Os11g07490 component CstF64/Rna15 of Cleavage Stimulatory Factor... 0.05 OrthoFinder output from all 47 species
Ore_g15576 ESP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g069160.3.1 CSTF64, Solyc02g069160 component CstF64/Rna15 of Cleavage Stimulatory Factor... 0.03 OrthoFinder output from all 47 species
Spa_g04979 ESP1 component *(ESP1) of Cleavage Stimulatory Factor (CstF)... 0.03 OrthoFinder output from all 47 species
Tin_g11505 ESP1 component *(ESP1) of Cleavage Stimulatory Factor (CstF)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0031124 mRNA 3'-end processing IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006571 tyrosine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR026896 CSTF_C 420 452
No external refs found!