Description : no hits & (original description: none)
Gene families : OG0001642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001642_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g012494 | ESP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g016024 | CSTF64 | component *(CstF64/Rna15) of Cleavage Stimulatory Factor... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g104795 | CSTF64 | component *(CstF64/Rna15) of Cleavage Stimulatory Factor... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0245.g059945 | CSTF64 | component *(CstF64/Rna15) of Cleavage Stimulatory Factor... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01013670001 | CSTF64 | RNA processing.RNA 3-end polyadenylation.Cleavage... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g07490.1 | CSTF64, LOC_Os11g07490 | component CstF64/Rna15 of Cleavage Stimulatory Factor... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g15576 | ESP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g069160.3.1 | CSTF64, Solyc02g069160 | component CstF64/Rna15 of Cleavage Stimulatory Factor... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g04979 | ESP1 | component *(ESP1) of Cleavage Stimulatory Factor (CstF)... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g11505 | ESP1 | component *(ESP1) of Cleavage Stimulatory Factor (CstF)... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0031124 | mRNA 3'-end processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006570 | tyrosine metabolic process | IEP | HCCA |
BP | GO:0006571 | tyrosine biosynthetic process | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | HCCA |
BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR026896 | CSTF_C | 420 | 452 |
No external refs found! |