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  5. MA_88369g0010

MA_88369g0010 (TIL1, POL2A, ABO4,...)


Aliases : TIL1, POL2A, ABO4, EMB2284, ESD7, EMB142, EMB529

Description : catalytic component POL2/POLE1 of DNA polymerase epsilon complex


Gene families : OG0005358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_88369g0010
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00175760 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.13 OrthoFinder output from all 47 species
AMTR_s00040p00177210 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.12 OrthoFinder output from all 47 species
AT1G08260 TIL1, POL2A,... DNA polymerase epsilon catalytic subunit 0.04 OrthoFinder output from all 47 species
Als_g16530 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.08 OrthoFinder output from all 47 species
Aspi01Gene24972.t1 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.03 OrthoFinder output from all 47 species
Ceric.10G003400.1 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.24 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.30 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.31 TIL2, POL2B DNA polymerase epsilon catalytic subunit A... 0.02 OrthoFinder output from all 47 species
Cre03.g179961 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.06 OrthoFinder output from all 47 species
Dac_g06701 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.08 OrthoFinder output from all 47 species
Dcu_g42121 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.12 OrthoFinder output from all 47 species
GSVIVT01031365001 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
Gb_06608 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.1 OrthoFinder output from all 47 species
LOC_Os02g30800.1 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.1 OrthoFinder output from all 47 species
Len_g09288 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.06 OrthoFinder output from all 47 species
Mp3g08150.1 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.03 OrthoFinder output from all 47 species
Msp_g32528 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.03 OrthoFinder output from all 47 species
Nbi_g08627 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.11 OrthoFinder output from all 47 species
Smo442263 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 OrthoFinder output from all 47 species
Solyc11g067140.2.1 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.03 OrthoFinder output from all 47 species
Spa_g06995 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.09 OrthoFinder output from all 47 species
Tin_g44285 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.09 OrthoFinder output from all 47 species
Zm00001e014636_P002 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 2 92
IPR006134 DNA-dir_DNA_pol_B_multi_dom 453 765
No external refs found!