MA_842965g0020 (RPAC43, ATRPAC43)

Aliases : RPAC43, ATRPAC43

Description : no hits & (original description: none)

Gene families : OG0005805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005805_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_842965g0020

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00192780	RPAC43,...	DNA-directed RNA polymerases II, IV and V subunit 3...	0.03	OrthoFinder output from all 47 species
AT1G60850	ATRPAC42, AAC42	DNA-directed RNA polymerase family protein	0.03	OrthoFinder output from all 47 species
Azfi_s1783.g106746	RPAC43, ATRPAC43	not classified & original description: CDS=50-1021	0.03	OrthoFinder output from all 47 species
GSVIVT01014713001	RPAC43, ATRPAC43	DNA-directed RNA polymerases IV and V subunit 3B...	0.03	OrthoFinder output from all 47 species
Msp_g07241	RPAC43, ATRPAC43	component *(NRPC3) of RNA polymerase III complex &...	0.02	OrthoFinder output from all 47 species
Smo409226	RPAC43, ATRPAC43	DNA-directed RNA polymerases IV and V subunit 3B...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004298	threonine-type endopeptidase activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
CC	GO:0030880	RNA polymerase complex	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0070003	threonine-type peptidase activity	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011263	DNA-dir_RNA_pol_RpoA/D/Rpb3	64	100

External Links

No external refs found!

MA_842965g0020 (RPAC43, ATRPAC43)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation