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  5. MA_83516g0010

MA_83516g0010


Description : no hits & (original description: none)


Gene families : OG0001937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_83516g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g058606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58645.t1 Aspi01Gene58645 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007928 No alias not classified & original description: CDS=113-1447 0.03 OrthoFinder output from all 47 species
Cba_g08858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G122200.1 Ceric.01G122200 not classified & original description: pacid=50590409... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.34 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g16343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_07583 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g48260.1 LOC_Os03g48260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g05351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g12860.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g43635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g010440.4.1 Solyc01g010440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g56763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005299_P002 Zm00001e005299 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e012268_P003 Zm00001e012268 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!