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  5. MA_71146g0020

MA_71146g0020


Description : no hits & (original description: none)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_71146g0020
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.01 OrthoFinder output from all 47 species
Aspi01Gene28895.t1 BRH1, Aspi01Gene28895 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G091300.1 Ceric.09G091300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.15G075700.1 Ceric.15G075700 not classified & original description: pacid=50639640... 0.04 OrthoFinder output from all 47 species
Dcu_g00774 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dde_g38231 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
LOC_Os04g49160.1 LOC_Os04g49160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g39260.1 LOC_Os05g39260 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g24628 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
MA_10432668g0010 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_13397g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_2159g0010 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_227897g0010 ATL2, TL2 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_38690g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_5170g0020 BRH1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7553g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g02738 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g096650.3.1 Solyc01g096650 Putative RING-H2 finger protein ATL69 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc09g066300.3.1 Solyc09g066300 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g066510.3.1 Solyc11g066510 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e023260_P001 Zm00001e023260 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 237 280
No external refs found!