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MA_704359g0010


Description : Coatomer subunit beta-1 OS=Arabidopsis thaliana (sp|q9sv21|copb1_arath : 430.0)


Gene families : OG0002649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_704359g0010
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00238440 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 OrthoFinder output from all 47 species
AT4G31480 No alias Coatomer, beta subunit 0.04 OrthoFinder output from all 47 species
Adi_g059782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0279.g062259 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Cre04.g217921 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dcu_g03132 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02878 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01035511001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Gb_03760 No alias subunit beta of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
Gb_23100 No alias subunit beta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
LOC_Os11g07280.1 LOC_Os11g07280 subunit beta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Len_g12104 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Lfl_g04220 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Mp5g08450.1 No alias subunit beta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
Msp_g15814 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ore_g05742 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ore_g17465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02305 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011640 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Sam_g19453 No alias subunit beta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Solyc01g007150.3.1 Solyc01g007150 subunit beta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Zm00001e009041_P001 Zm00001e009041 subunit beta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Zm00001e017416_P001 Zm00001e017416 subunit beta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Zm00001e025465_P001 Zm00001e025465 subunit beta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 29 296
No external refs found!