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MA_6738g0020


Description : F-box/kelch-repeat protein At5g42360 OS=Arabidopsis thaliana (sp|q9fii1|fk118_arath : 392.0)


Gene families : OG0009835 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009835_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6738g0020

Target Alias Description ECC score Gene Family Method Actions
Gb_16521 No alias F-box/kelch-repeat protein At5g42350 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc04g082580.3.1 Solyc04g082580 F-box/kelch-repeat protein At5g42350 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e034904_P001 Zm00001e034904 F-box/kelch-repeat protein At5g42350 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 266 321
IPR006652 Kelch_1 462 492
IPR001810 F-box_dom 179 211
No external refs found!