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  5. MA_6521877g0010

MA_6521877g0010


Description : RIMA RNA polymerase nuclear import factor


Gene families : OG0005503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6521877g0010

Target Alias Description ECC score Gene Family Method Actions
Lfl_g17423 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g06841 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e027549_P001 Zm00001e027549 RIMA RNA polymerase nuclear import factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR007308 Rtr1/RPAP2_dom 31 106
No external refs found!