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  5. MA_6494080g0010

MA_6494080g0010


Description : no hits & (original description: none)


Gene families : OG0000676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6494080g0010
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00212240 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00002p00212250 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00003p00264210 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00175p00033590 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G54890 No alias Late embryogenesis abundant (LEA) protein-related 0.02 OrthoFinder output from all 47 species
AT4G27400 No alias Late embryogenesis abundant (LEA) protein-related 0.04 OrthoFinder output from all 47 species
AT5G54370 No alias Late embryogenesis abundant (LEA) protein-related 0.04 OrthoFinder output from all 47 species
AT5G60520 No alias Late embryogenesis abundant (LEA) protein-related 0.03 OrthoFinder output from all 47 species
AT5G60530 No alias late embryogenesis abundant protein-related / LEA protein-related 0.04 OrthoFinder output from all 47 species
Aev_g19245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G032000.1 Ceric.26G032000 not classified & original description: pacid=50599460... 0.06 OrthoFinder output from all 47 species
Ceric.26G032300.1 Ceric.26G032300 not classified & original description: pacid=50600130... 0.04 OrthoFinder output from all 47 species
Dcu_g28701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g29247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_38738 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g73700.1 LOC_Os01g73700 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g73710.1 LOC_Os01g73710 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g73720.1 LOC_Os01g73720 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g73730.1 LOC_Os01g73730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g01680.1 LOC_Os05g01680 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g47940.1 LOC_Os05g47940 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g05360.1 LOC_Os11g05360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g35928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428258g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_558137g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_63925g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g03490.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g11810.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g08760.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pp3c1_3090V3.1 Pp3c1_3090 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g11897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g107710.2.1 Solyc01g107710 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc01g107720.3.1 Solyc01g107720 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc06g034130.2.1 Solyc06g034130 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc11g069280.2.1 Solyc11g069280 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc11g073140.2.1 Solyc11g073140 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc11g073150.1.1 Solyc11g073150 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g37258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002062_P001 Zm00001e002062 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e018525_P001 Zm00001e018525 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e018526_P001 Zm00001e018526 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e018527_P001 Zm00001e018527 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e021386_P001 Zm00001e021386 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e024129_P001 Zm00001e024129 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e028269_P001 Zm00001e028269 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e029686_P001 Zm00001e029686 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009646 Root_cap 42 98
No external refs found!