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  5. MA_62110g0010

MA_62110g0010 (TPL, WSIP1)


Aliases : TPL, WSIP1

Description : Protein TPR2 OS=Oryza sativa subsp. japonica (sp|q0j7u6|tpr2_orysj : 768.0)


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_62110g0010
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Adi_g035575 TPR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066123 TPL, WSIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066586 TPR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081386 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Aev_g32979 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Als_g43720 TPL, WSIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10285.t2 TPR1, Aspi01Gene10285 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g61200 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Len_g18450 TPR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436206g0010 TPR1 Protein TPR2 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
MA_162723g0010 WSIP2, TPR4 Topless-related protein 4 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g38873 TPR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49610 TPR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13544 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g18017 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Sam_g14536 No alias transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Spa_g47525 TPR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 633 667
IPR001680 WD40_repeat 177 210
No external refs found!