MA_609805g0010 (UBP2, ATUBP2)

Aliases : UBP2, ATUBP2

Description : deubiquitinase (UBP1-2)

Gene families : OG0003367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003367_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_609805g0010
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
Adi_g019437	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g07996	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g02672	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.04	OrthoFinder output from all 47 species
Cre12.g533250	UBP2, ATUBP2	No description available	0.02	OrthoFinder output from all 47 species
Dcu_g09668	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os09g32740.1	UBP2, ATUBP2,...	deubiquitinase (UBP1-2)	0.02	OrthoFinder output from all 47 species
Ore_g37204	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020448	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: CDS=154-3663	0.02	OrthoFinder output from all 47 species
Solyc09g091930.3.1	UBP2, ATUBP2,...	deubiquitinase (UBP1-2)	0.09	OrthoFinder output from all 47 species
Zm00001e010116_P001	ATUBP1, UBP1,...	deubiquitinase (UBP1-2)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	HCCA
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
MF	GO:0031369	translation initiation factor binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001607	Znf_UBP	97	157
IPR001394	Peptidase_C19_UCH	230	441

External Links

No external refs found!

MA_609805g0010 (UBP2, ATUBP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation