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  5. MA_5951905g0010

MA_5951905g0010 (HIS1-3)


Aliases : HIS1-3

Description : linker histone (H1)


Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5951905g0010

Target Alias Description ECC score Gene Family Method Actions
Als_g06787 HIS1-3 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14110 No alias linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03001.t1 HIS1-3, Aspi01Gene03001 regulatory component *(Tom5) of outer mitochondrion... 0.02 OrthoFinder output from all 47 species
Aspi01Gene23118.t1 Aspi01Gene23118 linker histone *(H1) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene61452.t1 HIS1-3, Aspi01Gene61452 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31405 HIS1-3 linker histone *(H1) & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01018807001 HIS1-3 Chromatin organisation.histones.H1 linker histone 0.03 OrthoFinder output from all 47 species
GSVIVT01036230001 No alias Chromatin organisation.histones.H1 linker histone 0.06 OrthoFinder output from all 47 species
LOC_Os07g08710.1 LOC_Os07g08710 linker histone (H1) 0.03 OrthoFinder output from all 47 species
Len_g04604 HIS1-3 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g20296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27513 HIS1-3 linker histone *(H1) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g16562 No alias linker histone *(H1) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g63119 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 66 132
No external refs found!