MA_5038g0010 (ATPP2-B11, PP2-B11)


Aliases : ATPP2-B11, PP2-B11

Description : F-box protein PP2-B11 OS=Arabidopsis thaliana (sp|q949s5|p2b11_arath : 170.0)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5038g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G09155 PP2-B15, AtPP2-B15 phloem protein 2-B15 0.03 OrthoFinder output from all 47 species
AT1G33920 ATPP2-A4, PP2-A4 phloem protein 2-A4 0.07 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.04 OrthoFinder output from all 47 species
AT2G02320 AtPP2-B7, PP2-B7 phloem protein 2-B7 0.03 OrthoFinder output from all 47 species
Adi_g084634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58763 PP2-A15, AtPP2-A15 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05608 AtPP2-A13, PP2-A13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55189.t2 ATPP2-A4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0322.g064518 No alias not classified & original description: CDS=191-1105 0.02 OrthoFinder output from all 47 species
Azfi_s0322.g064524 No alias not classified & original description: CDS=1-477 0.03 OrthoFinder output from all 47 species
Azfi_s2399.g111181 No alias not classified & original description: CDS=192-1106 0.05 OrthoFinder output from all 47 species
Ceric.16G068200.1 Ceric.16G068200 not classified & original description: pacid=50588941... 0.06 OrthoFinder output from all 47 species
Ceric.16G068300.1 Ceric.16G068300 not classified & original description: pacid=50589756... 0.03 OrthoFinder output from all 47 species
Dac_g17005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21011 ATPP2-B11, PP2-B11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019854001 PP2-A11, AtPP2-A11 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os12g03594.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g12017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18202 AtPP2-A13, PP2-A13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25665 MEE66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_203210g0010 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp1g08200.1 AtPP2-A12, PP2-A12 F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g11862 PP2-A11, AtPP2-A11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23028 AtPP2-B1, PP2-B1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23616 ATPP2-A4, PP2-A4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g100000.3.1 PP2-B15,... F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g080360.3.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Solyc10g085490.3.1 PP2-A15,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Solyc12g098200.2.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e016195_P001 AtPP2-B1,... F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e040260_P002 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e041427_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 106 263
IPR001810 F-box_dom 14 55
No external refs found!