1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_495935g0010

MA_495935g0010 (ISE1, EMB1586)


Aliases : ISE1, EMB1586

Description : DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana (sp|q8w4e1|rh47_arath : 514.0)


Gene families : OG0006427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006427_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_495935g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G12770 ISE1, EMB1586 P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Aev_g02379 ISE1, EMB1586 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00974 ISE1, EMB1586 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11392 ISE1, EMB1586 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g02013 ISE1, EMB1586 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.18G072800.1 ISE1, EMB1586,... not classified & original description: pacid=50621729... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021346.2 RH39 DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Cre07.g349300 ISE1, EMB1586 DEAD-box ATP-dependent RNA helicase 47, mitochondrial... 0.01 OrthoFinder output from all 47 species
Dde_g16936 ISE1, EMB1586 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g42406.1 ISE1, EMB1586,... DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os03g12000.1 ISE1, EMB1586,... DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp2g16530.1 ISE1, EMB1586 DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Ore_g20655 ISE1, EMB1586 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10294 ISE1, EMB1586 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 533 638
IPR011545 DEAD/DEAH_box_helicase_dom 275 467
No external refs found!