MA_467593g0010 (RAP2.12)

Aliases : RAP2.12

Description : no hits & (original description: none)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_467593g0010
Cluster	HCCA: Cluster_219

Target	Alias	Description	ECC score	Gene Family Method
AT4G25490	DREB1B, ATCBF1, CBF1	C-repeat/DRE binding factor 1	0.02	OrthoFinder output from all 47 species
MA_10062104g0010	ORA47	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
MA_175747g0010	ORA47	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
MA_214224g0010	ATERF3, ERF3	transcription factor (ERF)	0.08	OrthoFinder output from all 47 species
MA_24801g0010	No alias	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
MA_287886g0010	ORA47	transcription factor (DREB)	0.08	OrthoFinder output from all 47 species
MA_310g0010	ATERF-9, ERF9, ATERF9	Ethylene-responsive transcription factor 4 OS=Nicotiana...	0.03	OrthoFinder output from all 47 species
MA_46347g0010	PUCHI	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_67707g0010	TINY2	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_67841g0010	tny	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
MA_69434g0020	ERF-1, ATERF-1	Ethylene-responsive transcription factor 1 OS=Solanum...	0.02	OrthoFinder output from all 47 species
MA_82481g0010	HRD	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
MA_93229g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.05	OrthoFinder output from all 47 species
Msp_g30400	TINY2	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g06505	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEP	HCCA
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	HCCA
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	7	56

External Links

No external refs found!

MA_467593g0010 (RAP2.12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation