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Description : component NOT1 of mRNA deadenylation CCR4-NOT complex
Gene families : OG0002046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002046_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00106p00133350 | evm_27.TU.AmTr_v1... | RNA processing.RNA decay.deadenylation-dependent... | 0.11 | OrthoFinder output from all 47 species | |
| AT1G02080 | No alias | transcription regulators | 0.22 | OrthoFinder output from all 47 species | |
| Adi_g055874 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g12815 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.08 | OrthoFinder output from all 47 species | |
| Als_g17486 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g22134 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g06241 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene28294.t1 | Aspi01Gene28294 | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035985 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g12926 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.34G056500.1 | Ceric.34G056500 | scaffold component *(NOT1) of mRNA deadenylation... | 0.1 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000767.19 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000767.20 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cre14.g632950 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02066 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g01777 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000874001 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.15 | OrthoFinder output from all 47 species | |
| GSVIVT01018178001 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018721001 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.16 | OrthoFinder output from all 47 species | |
| Gb_12251 | No alias | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g40780.1 | LOC_Os10g40780 | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.1 | OrthoFinder output from all 47 species | |
| Len_g12091 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g10188 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| MA_1121588g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Mp3g11860.1 | No alias | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.13 | OrthoFinder output from all 47 species | |
| Ore_g16116 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g16782 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22265 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0261.g026893 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.11 | OrthoFinder output from all 47 species | |
| Sam_g40588 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.08 | OrthoFinder output from all 47 species | |
| Smo440060 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.12 | OrthoFinder output from all 47 species | |
| Solyc01g090780.3.1 | Solyc01g090780 | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.15 | OrthoFinder output from all 47 species | |
| Tin_g16815 | No alias | scaffold component *(NOT1) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e000031_P001 | Zm00001e000031 | component NOT1 of mRNA deadenylation CCR4-NOT complex | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0030623 | U5 snRNA binding | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| No external refs found! |