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  5. MA_426345g0010

MA_426345g0010


Description : no hits & (original description: none)


Gene families : OG0002999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_426345g0010
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0072.g037044 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.02G098900.1 Ceric.02G098900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.35G063100.1 ATL43, Ceric.35G063100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
GSVIVT01029257001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
MA_179334g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Pir_g49281 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Solyc05g018310.1.1 Solyc05g018310 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Solyc07g007440.1.1 ATL43, Solyc07g007440 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e013130_P001 ATL43, Zm00001e013130 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!