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MA_4032367g0010 (RNS3)


Aliases : RNS3

Description : Ribonuclease 3 OS=Arabidopsis thaliana (sp|p42815|rns3_arath : 86.3)


Gene families : OG0001771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001771_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_4032367g0010
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262550 evm_27.TU.AmTr_v1... Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
AMTR_s00064p00080140 ATRNS1, RNS1,... Ribonuclease 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00064p00084600 evm_27.TU.AmTr_v1... Ribonuclease 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G26820 RNS3 ribonuclease 3 0.03 OrthoFinder output from all 47 species
Aop_g15509 No alias T2-type RNase *(RNS) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011037 ATRNS1, RNS1 T2-type RNase *(RNS) & original description: CDS=123-812 0.03 OrthoFinder output from all 47 species
Dac_g17901 No alias T2-type RNase *(RNS) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09371 ATRNS1, RNS1 T2-type RNase *(RNS) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019974001 ATRNS1, RNS1 Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Gb_27893 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_30835 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_30836 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Gb_41024 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g43670.1 ATRNS1, RNS1,... Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g36700.1 LOC_Os09g36700 Ribonuclease 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10284254g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g44320 ATRNS1, RNS1 T2-type RNase *(RNS) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 14 79
No external refs found!