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MA_401711g0010


Description : U2 small nuclear ribonucleoprotein B 2 OS=Arabidopsis thaliana (sp|q8h1s6|ru2b2_arath : 132.0)


Gene families : OG0003415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_401711g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00113610 U2B'',... RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
LOC_Os03g18720.1 LOC_Os03g18720 protein factor U2B of U2 small nuclear ribonucleoprotein... 0.06 OrthoFinder output from all 47 species
Zm00001e038386_P002 U2B'', Zm00001e038386 protein factor U2B of U2 small nuclear ribonucleoprotein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 62
No external refs found!