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MA_39935g0010 (DSK2)


Aliases : DSK2

Description : autophagic adaptor protein (DSK2)


Gene families : OG0001912 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_39935g0010
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00026840 DSK2,... Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Ala_g14983 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.05 OrthoFinder output from all 47 species
Als_g08349 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Cba_g14487 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Ceric.21G029800.1 DSK2, Ceric.21G029800 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g05630 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Gb_09865 DSK2 autophagic adaptor protein (DSK2) 0.03 OrthoFinder output from all 47 species
Ore_g16088 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.04 OrthoFinder output from all 47 species
Ore_g23080 DSK2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25539 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Ore_g33853 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g13508 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Smo171198 No alias Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g032160.3.1 DSK2, Solyc03g032160 autophagic adaptor protein (DSK2) 0.05 OrthoFinder output from all 47 species
Spa_g06039 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0035658 Mon1-Ccz1 complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 119 186
No external refs found!