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Description : Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana (sp|q9luj4|pp248_arath : 413.0)
Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00035300 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g25210,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00019p00238660 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g20300,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00033p00156340 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g80550,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00105p00044870 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g71060,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00029960 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00131p00098210 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g13040,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G20300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G71060 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G16010 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G62470 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G14820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G43820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g023342 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g057762 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g01020 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03187 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g08644 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g48152 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g22080 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11133 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g15608 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g26096 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g39755 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g00769 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g36532 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G058100.1 | Ceric.18G058100 | not classified & original description: pacid=50622152... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020723.110 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07047 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10060 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02250 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g07270 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23072 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01007280001 | No alias | Pentatricopeptide repeat-containing protein At3g49730... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008815001 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014289001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015982001 | No alias | Pentatricopeptide repeat-containing protein At1g80880,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017111001 | No alias | Pentatricopeptide repeat-containing protein At3g16010... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01026463001 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027388001 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029740001 | No alias | Pentatricopeptide repeat-containing protein At3g62470,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_05336 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06907 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_11871 | No alias | Pentatricopeptide repeat-containing protein At3g49730... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_13617 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20750 | No alias | Pentatricopeptide repeat-containing protein At5g64320,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21593 | No alias | Pentatricopeptide repeat-containing protein At1g71060,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_22860 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23459 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32987 | No alias | Pentatricopeptide repeat-containing protein At5g18390,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41835 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g05860.1 | LOC_Os01g05860 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g20160.1 | LOC_Os02g20160 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g38950.1 | LOC_Os02g38950 | Pentatricopeptide repeat-containing protein At3g04130,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g52220.1 | LOC_Os02g52220 | Pentatricopeptide repeat-containing protein At1g73400,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g51840.1 | LOC_Os03g51840 | Pentatricopeptide repeat-containing protein At3g49730... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g24369 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432868g0030 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10433557g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27800,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_128052g0010 | No alias | Pentatricopeptide repeat-containing protein At3g53700,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_355286g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_8206159g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_845827g0010 | No alias | Pentatricopeptide repeat-containing protein At1g06710,... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g20290.1 | No alias | Pentatricopeptide repeat-containing protein At3g06920... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g08820 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g27283 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g01365 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29941 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015082 | No alias | not classified & original description: CDS=1-1587 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14954 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24475 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g006850.1.1 | Solyc01g006850 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g076370.4.1 | Solyc04g076370 | Pentatricopeptide repeat-containing protein At2g27800,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g081950.4.1 | Solyc04g081950 | Pentatricopeptide repeat-containing protein At1g20300,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g008330.3.1 | Solyc05g008330 | Pentatricopeptide repeat-containing protein At1g71060,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g071670.2.1 | Solyc11g071670 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09961 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005446_P003 | Zm00001e005446 | group-II intron mitochondrial splicing factor (MISF68) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013118_P001 | Zm00001e013118 | Pentatricopeptide repeat-containing protein At3g61360... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025816_P001 | Zm00001e025816 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026896_P001 | Zm00001e026896 | Pentatricopeptide repeat-containing protein At3g62470,... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e028873_P001 | Zm00001e028873 | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031478_P001 | Zm00001e031478 | Pentatricopeptide repeat-containing protein At3g62470,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036197_P001 | Zm00001e036197 | Pentatricopeptide repeat-containing protein At1g71060,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0040008 | regulation of growth | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| BP | GO:0045927 | positive regulation of growth | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| No external refs found! |