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Aliases : CPS, ATCPS1, ABC33, CPS1, GA1
Description : Alpha-bisabolene synthase OS=Abies grandis (sp|o81086|tpsd1_abigr : 384.0)
Gene families : OG0006488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006488_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_34273g0020 | |
| Cluster | HCCA: Cluster_229 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dac_g14672 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21648 | CPS, ATCPS1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g29134 | CPS, ATCPS1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g30449 | CPS, ATCPS1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43445 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g30539 | CPS, ATCPS1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_05030 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_06744 | No alias | mono-/sesquiterpene-/diterpene synthase. ent-copalyl... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_12468 | TPS02 | mono-/sesquiterpene-/diterpene synthase | 0.07 | OrthoFinder output from all 47 species | |
| Gb_13703 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_13713 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_15692 | KS, KS1, ATKS1, ATKS, GA2 | Alpha-bisabolene synthase OS=Abies grandis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17366 | CPS, ATCPS1,... | mono-/sesquiterpene-/diterpene synthase | 0.04 | OrthoFinder output from all 47 species | |
| Gb_17941 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_36202 | KS, KS1, ATKS1, ATKS, GA2 | Alpha-bisabolene synthase OS=Abies grandis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_39147 | CPS, ATCPS1,... | ent-copalyl diphosphate synthase | 0.06 | OrthoFinder output from all 47 species | |
| Len_g37092 | CPS, ATCPS1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g23246 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431370g0010 | No alias | Bifunctional isopimaradiene synthase, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10435334g0020 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_129574g0010 | KS, KS1, ATKS1, ATKS, GA2 | Bifunctional levopimaradiene synthase, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| MA_176370g0020 | No alias | Bifunctional isopimaradiene synthase, chloroplastic... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g31705 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g34951 | CPS, ATCPS1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36956 | CPS, ATCPS1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g08618 | CPS, ATCPS1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g19537 | CPS, ATCPS1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63465 | CPS, ATCPS1,... | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Solyc03g006545.1.1 | KS, KS1, ATKS1,... | Ent-kaur-16-ene synthase, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g005635.1.1 | KS, KS1, ATKS1,... | Beta-phellandrene synthase... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |