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  5. MA_31065g0010

MA_31065g0010


Description : no hits & (original description: none)


Gene families : OG0001699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001699_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_31065g0010
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00037420 evm_27.TU.AmTr_v1... DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Azfi_s0093.g043334 No alias not classified & original description: CDS=1-2907 0.03 OrthoFinder output from all 47 species
Cre09.g399907 No alias DNA ligase 6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01000444001 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_02140 SNM1, ATSNM1 SNM interstrand crosslink repair factor 0.09 OrthoFinder output from all 47 species
LOC_Os09g26760.1 LOC_Os09g26760 DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Mp1g24430.1 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Zm00001e009882_P001 Zm00001e009882 DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR001660 SAM 525 581
No external refs found!