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  5. MA_30833g0020

MA_30833g0020 (AMY1, ATAMY1)


Aliases : AMY1, ATAMY1

Description : alpha amylase


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_30833g0020

Target Alias Description ECC score Gene Family Method Actions
Ehy_g02577 AMY2, ATAMY2 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15848 AMY2, ATAMY2 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031746001 AMY1, ATAMY1 Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
Gb_30448 AMY1, ATAMY1 alpha amylase 0.03 OrthoFinder output from all 47 species
LOC_Os02g52710.1 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
LOC_Os09g28420.1 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
Msp_g05711 AMY2, ATAMY2 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09924 AMY3, ATAMY3 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32723 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20712 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034028_P002 AMY1, ATAMY1,... alpha amylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 395 455
IPR006047 Glyco_hydro_13_cat_dom 73 374
No external refs found!