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  5. MA_257738g0010

MA_257738g0010 (ATCAP-C, ATSMC4, SMC3, ATSMC3)


Aliases : ATCAP-C, ATSMC4, SMC3, ATSMC3

Description : no hits & (original description: none)


Gene families : OG0004748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004748_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_257738g0010
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00079920 ATCAP-C, ATSMC4,... Cell cycle.mitosis and meiosis.chromatin... 0.12 OrthoFinder output from all 47 species
Ala_g23510 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.05 OrthoFinder output from all 47 species
Als_g16126 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.07 OrthoFinder output from all 47 species
Aop_g09601 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.08 OrthoFinder output from all 47 species
Aspi01Gene04548.t1 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.06 OrthoFinder output from all 47 species
Azfi_s0093.g043172 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.06 OrthoFinder output from all 47 species
Ceric.07G037500.1 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.15 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000711.41 ATCAP-C, ATSMC4,... Cell cycle.mitosis and meiosis.chromatin... 0.03 OrthoFinder output from all 47 species
Cre12.g493400 ATCAP-C, ATSMC4,... Cell cycle.mitosis and meiosis.chromatin... 0.06 OrthoFinder output from all 47 species
Dac_g01058 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.06 OrthoFinder output from all 47 species
Dcu_g14679 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.1 OrthoFinder output from all 47 species
GSVIVT01011408001 ATCAP-C, ATSMC4,... Cell cycle.mitosis and meiosis.chromatin... 0.12 OrthoFinder output from all 47 species
Gb_03310 ATCAP-C, ATSMC4,... component CAP-C/SMC4 of condensin I/II complex 0.13 OrthoFinder output from all 47 species
LOC_Os05g41750.1 ATCAP-C, ATSMC4,... component CAP-C/SMC4 of condensin I/II complex 0.08 OrthoFinder output from all 47 species
Len_g03914 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.08 OrthoFinder output from all 47 species
Mp5g06430.1 ATCAP-C, ATSMC4,... component CAP-C/SMC4 of condensin I/II complex 0.14 OrthoFinder output from all 47 species
Msp_g32088 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.06 OrthoFinder output from all 47 species
Nbi_g09270 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.1 OrthoFinder output from all 47 species
Ppi_g09236 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015991 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.04 OrthoFinder output from all 47 species
Sam_g07968 No alias component *(CAP-C/SMC4) of condensin I/II complex &... 0.05 OrthoFinder output from all 47 species
Solyc02g087980.3.1 ATCAP-C, ATSMC4,... component CAP-C/SMC4 of condensin I/II complex 0.1 OrthoFinder output from all 47 species
Spa_g10497 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.04 OrthoFinder output from all 47 species
Tin_g01288 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.07 OrthoFinder output from all 47 species
Zm00001e032031_P001 ATCAP-C, ATSMC4,... component CAP-C/SMC4 of condensin I/II complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!