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Aliases : RHA3B
Description : no hits & (original description: none)
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_214717g0010 | |
| Cluster | HCCA: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00056710 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00021p00161170 | ATL2, TL2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G49200 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G49210 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G49230 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G67856 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G42360 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G05200 | ATL6 | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G38140 | No alias | RING/U-box superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g026101 | ATRING1, RING1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g051114 | No alias | E3 ubiquitin ligase *(BRH) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g16138 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39254 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g12786 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g17608 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23533 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g42113 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g52149 | ATL5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01421.t1 | Aspi01Gene01421 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene28894.t1 | BRH1, Aspi01Gene28894 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene70839.t1 | Aspi01Gene70839 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g31712 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g38589 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G045100.1 | Ceric.06G045100 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G057600.1 | Ceric.07G057600 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G013700.1 | RHA3A, Ceric.13G013700 | not classified & original description: pacid=50636450... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g14773 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02946 | MEE16 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g05475 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g11694 | ATL43 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g48934 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07562 | XERICO | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012015001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01012022001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020665001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032684001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_14775 | No alias | RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g11460.1 | ATL43, LOC_Os01g11460 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g11520.1 | LOC_Os01g11520 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g15110.1 | LOC_Os02g15110 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g33720.1 | LOC_Os02g33720 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g36300.1 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g37450.1 | LOC_Os02g37450 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g45780.1 | LOC_Os02g45780 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g22110.1 | ATL5, LOC_Os03g22110 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g28080.1 | ATL3, LOC_Os03g28080 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g44636.1 | LOC_Os03g44636 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g29150.1 | ATL8, LOC_Os05g29150 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g39260.1 | LOC_Os05g39260 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g40020.1 | LOC_Os05g40020 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g08820.1 | LOC_Os06g08820 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g34180.1 | LOC_Os07g34180 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g36500.1 | RHA3A, LOC_Os09g36500 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g38110.1 | LOC_Os09g38110 | RING-H2 finger protein ATL80 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g02220.1 | LOC_Os12g02220 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g42530.1 | RHA3B, LOC_Os12g42530 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12737 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g23799 | BRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10244600g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| MA_10426834g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10434759g0010 | BRH1 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10436650g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_12363g0010 | No alias | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_129478g0010 | BRH1 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| MA_1623327g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_17249g0010 | No alias | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_308999g0010 | ATL2, TL2 | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_308999g0020 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_31736g0010 | BRH1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_465316g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_68992g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_69343g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_711804g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_92848g0010 | No alias | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g08106 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g14103 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41833 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g17726 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g45759 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c23_1651V3.1 | Pp3c23_1651 | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0104.g020113 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0116.g021081 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo8844 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Smo96681 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc01g006910.4.1 | Solyc01g006910 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g068415.1.1 | RHA3A, Solyc02g068415 | RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g114190.1.1 | Solyc03g114190 | RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g007230.2.1 | ATL2, TL2, Solyc06g007230 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g053640.1.1 | Solyc06g053640 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g075320.1.1 | ATL2, TL2, Solyc09g075320 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g005300.2.1 | Solyc11g005300 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g066510.3.1 | Solyc11g066510 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g073170.1.1 | Solyc11g073170 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08408 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g15796 | RHA3B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g29342 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g38079 | MEE16 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03901 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e001923_P001 | ATL3, Zm00001e001923 | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e003264_P001 | Zm00001e003264 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e007956_P001 | ATRING1, RING1,... | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010029_P001 | XERICO, Zm00001e010029 | ubiquitin protein ligase (XERICO) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010787_P001 | ATL3, Zm00001e010787 | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e014764_P001 | Zm00001e014764 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015470_P001 | ATL8, Zm00001e015470 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015905_P001 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016474_P001 | Zm00001e016474 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019779_P001 | Zm00001e019779 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021729_P001 | RHA3B, Zm00001e021729 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022781_P001 | Zm00001e022781 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023234_P001 | BRH1, Zm00001e023234 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023238_P001 | Zm00001e023238 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029032_P001 | Zm00001e029032 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e031874_P001 | Zm00001e031874 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e032186_P001 | RHA3B, Zm00001e032186 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e034421_P001 | ATL6, Zm00001e034421 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041385_P001 | Zm00001e041385 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041409_P001 | BRH1, Zm00001e041409 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004568 | chitinase activity | IEP | HCCA |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | HCCA |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | HCCA |
| BP | GO:0006030 | chitin metabolic process | IEP | HCCA |
| BP | GO:0006032 | chitin catabolic process | IEP | HCCA |
| BP | GO:0006040 | amino sugar metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0046348 | amino sugar catabolic process | IEP | HCCA |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | HCCA |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |