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  5. MA_196364g0010

MA_196364g0010 (SLY1)


Aliases : SLY1

Description : SLY-type gibberellin signal transducer. component F-box of SCF E3 ubiquitin ligase complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_196364g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00055630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00114p00120290 evm_27.TU.AmTr_v1... Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT2G36090 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT3G44326 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT4G24210 SLY1 F-box family protein 0.03 OrthoFinder output from all 47 species
Aev_g04411 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ala_g01481 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Als_g60927 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23959.t1 SLY1, Aspi01Gene23959 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Dac_g14808 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.05 OrthoFinder output from all 47 species
Dac_g16268 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
Dcu_g11655 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01011119001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_08961 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.07 OrthoFinder output from all 47 species
Gb_08963 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.06 OrthoFinder output from all 47 species
Gb_22367 SLY2 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
LOC_Os04g33820.1 LOC_Os04g33820 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_164016g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.04 OrthoFinder output from all 47 species
MA_92836g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.04 OrthoFinder output from all 47 species
MA_9868304g0010 SLY1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g18489 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ore_g26122 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Pnu_g17370 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Smo423923 SLY1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc07g047680.3.1 SLY2, Solyc07g047680 SLY-type gibberellin signal transducer. component F-box... 0.04 OrthoFinder output from all 47 species
Tin_g03889 No alias substrate adaptor of SCF E3 ubiquiTin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Zm00001e014737_P001 Zm00001e014737 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e014934_P001 SLY1, Zm00001e014934 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 32 70
No external refs found!