MA_19453g0040 (ATHB1, ATHB-1, HAT5,...)

Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_19453g0040
Cluster	HCCA: Cluster_229

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267430	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AT1G27045	No alias	Homeobox-leucine zipper protein family	0.02	OrthoFinder output from all 47 species
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.03	OrthoFinder output from all 47 species
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.02	OrthoFinder output from all 47 species
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.03	OrthoFinder output from all 47 species
AT5G15150	ATHB3, HB-3, ATHB-3, HAT7	homeobox 3	0.03	OrthoFinder output from all 47 species
Adi_g020725	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Adi_g054904	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g082074	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g116604	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g116605	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g10824	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g21465	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Ala_g10993	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g22584	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g23746	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g28925	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aob_g11711	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene06221.t1	ATHB40, HB40,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene38379.t1	HB6, ATHB6,...	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Aspi01Gene38597.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g08571	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ceric.14G007200.1	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000789.4	HAT14	RNA biosynthesis.transcriptional activation.HB...	0.01	OrthoFinder output from all 47 species
Dac_g21371	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g18383	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g07592	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g10606	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g23915	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01020033001	ATHB13	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
Gb_20878	ATHB3, HB-3, ATHB-3, HAT7	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
LOC_Os02g43330.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os08g32080.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os08g32085.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os09g35910.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os10g23090.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Len_g08275	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g10023	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Len_g12116	ATHB53, HB53, HB-8	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g19610	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Len_g36310	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Len_g45930	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Len_g51073	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Len_g54666	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Msp_g05256	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Msp_g06076	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Msp_g13239	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Nbi_g09101	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Nbi_g29745	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g03345	HB6, ATHB6	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Ore_g03346	HB6, ATHB6	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Ore_g29369	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g41934	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g29089	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g06112	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g26806	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Pnu_g32938	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ppi_g02012	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ppi_g42603	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc03g034130.4.1	ATHB40, HB40,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Solyc03g082550.3.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc11g010270.2.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Spa_g02959	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g16234	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g55691	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	HCCA
BP	GO:0017007	protein-bilin linkage	IEP	HCCA
BP	GO:0017009	protein-phycocyanobilin linkage	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	136	177
IPR001356	Homeobox_dom	81	134

External Links

No external refs found!

MA_19453g0040 (ATHB1, ATHB-1, HAT5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation