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  5. MA_18372g0010

MA_18372g0010 (CHR24)


Aliases : CHR24

Description : Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana (sp|q8w103|chr24_arath : 335.0)


Gene families : OG0005354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005354_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_18372g0010
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00159p00042980 CHR24,... Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
AT5G63950 CHR24 chromatin remodeling 24 0.05 OrthoFinder output from all 47 species
Aev_g20729 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13293 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G065600.1 CHR24, Ceric.22G065600 not classified & original description: pacid=50613904... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001292.5 CHR24 Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001292.6 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre03.g183350 CHR24 Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01026450001 CHR24 Chromatin organisation.chromatin remodeling... 0.07 OrthoFinder output from all 47 species
Gb_17075 CHR24 chromatin remodeling factor (ERCC6) 0.13 OrthoFinder output from all 47 species
LOC_Os04g59624.2 CHR24, LOC_Os04g59624 chromatin remodeling factor (ERCC6) 0.12 OrthoFinder output from all 47 species
Len_g15458 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g29760.1 CHR24 chromatin remodeling factor (ERCC6) 0.11 OrthoFinder output from all 47 species
Msp_g36236 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g03168 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.06 OrthoFinder output from all 47 species
Solyc01g068280.3.1 CHR24, Solyc01g068280 chromatin remodeling factor (ERCC6) 0.09 OrthoFinder output from all 47 species
Spa_g24729 CHR24 chromatin remodeling factor *(ERCC6) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007521_P001 CHR24, Zm00001e007521 chromatin remodeling factor (ERCC6) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 21 255
No external refs found!