Aliases : HIS1-3
Description : linker histone (H1)
Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_173054g0010 | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g36506 | HIS1-3 | linker histone *(H1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g05135 | HIS1-3 | linker histone *(H1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g36461 | HIS1-3 | linker histone *(H1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene25496.t1 | HIS1-3, Aspi01Gene25496 | linker histone *(H1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.30G041600.1 | Ceric.30G041600 | linker histone *(H1) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g09818 | HIS1-3 | linker histone *(H1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g19163 | No alias | linker histone *(H1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g09324 | HIS1-3 | linker histone *(H1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g20559 | No alias | linker histone *(H1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e032965_P005 | Zm00001e032965 | linker histone (H1) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006334 | nucleosome assembly | IEA | Interproscan |
CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0007034 | vacuolar transport | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 72 | 138 |
No external refs found! |