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  5. MA_16828g0010

MA_16828g0010


Description : no hits & (original description: none)


Gene families : OG0007378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_16828g0010

Target Alias Description ECC score Gene Family Method Actions
AT5G44710 No alias CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33,... 0.1 OrthoFinder output from all 47 species
Als_g41167 No alias component *(mS33) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.09G088200.1 Ceric.09G088200 component *(mS33) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01012160001 No alias No description available 0.08 OrthoFinder output from all 47 species
LOC_Os05g05560.1 LOC_Os05g05560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g06587 No alias component *(mS33) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Solyc07g055030.1.1 Solyc07g055030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g18487 No alias component *(mS33) of small mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Zm00001e027513_P001 Zm00001e027513 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013219 Ribosomal_S27/S33_mit 12 55
No external refs found!