Aliases : ATUBC2, UBC2
Description : ubiquitin-conjugating E2 protein
Gene families : OG0001764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001764_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_16089g0010 | |
Cluster | HCCA: Cluster_36 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G14400 | ATUBC1, UBC1 | ubiquitin carrier protein 1 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g067091 | ATUBC1, UBC1 | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene56299.t1 | ATUBC1, UBC1,... | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000737.3 | ATUBC1, UBC1 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Cre06.g294850 | ATUBC1, UBC1 | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g26488 | ATUBC1, UBC1 | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g57790.1 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g07240.1 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g113100.3.1 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.02 | OrthoFinder output from all 47 species | |
Spa_g14709 | ATUBC1, UBC1 | E2 ubiquitin-conjugating enzyme *(UBC1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g05799 | ATUBC1, UBC1 | E2 ubiquiTin-conjugaTing enzyme *(UBC1) & original... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g22958 | ATUBC1, UBC1 | E2 ubiquiTin-conjugaTing enzyme *(UBC1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011475_P001 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e029917_P003 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032886_P001 | ATUBC2, UBC2,... | ubiquitin-conjugating E2 protein | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000813 | ESCRT I complex | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0004177 | aminopeptidase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016197 | endosomal transport | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
CC | GO:0036452 | ESCRT complex | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0071985 | multivesicular body sorting pathway | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000608 | UBQ-conjugat_E2 | 8 | 144 |
No external refs found! |