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  5. MA_160330g0010

MA_160330g0010


Description : Protein CELLULOSE SYNTHASE INTERACTIVE 3 OS=Arabidopsis thaliana (sp|f4i718|csi3_arath : 423.0)


Gene families : OG0001114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_160330g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00216390 CSI1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Aev_g18895 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Als_g15837 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Als_g23027 CSI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13572 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene13132.t1 CSI1, Aspi01Gene13132 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22318.t1 CSI1, Aspi01Gene22318 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Ceric.34G038500.1 CSI1, Ceric.34G038500 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Dcu_g14963 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01022187001 CSI1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Len_g11450 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Lfl_g27979 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
MA_10437145g0010 No alias Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g26396 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Nbi_g07599 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Pir_g27649 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Solyc04g054480.3.1 CSI1, Solyc04g054480 CSI-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Spa_g26858 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Tin_g04197 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 823 906
IPR000225 Armadillo 261 298
No external refs found!