MA_156774g0010 (CKS1AT, CKS1)

Aliases : CKS1AT, CKS1

Description : scaffolding component CKS of cyclin-dependent kinase complex

Gene families : OG0002701 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002701_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_156774g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00140p00038880	evm_27.TU.AmTr_v1...	Cell cycle.regulation.cyclin-dependent kinase...	0.02	OrthoFinder output from all 47 species
Azfi_s0228.g059060	No alias	scaffold component *(CKS) of cyclin-dependent kinase...	0.03	OrthoFinder output from all 47 species
Dac_g26714	CKS2	scaffold component *(CKS) of cyclin-dependent kinase...	0.04	OrthoFinder output from all 47 species
Dde_g25426	CKS1AT, CKS1	scaffold component *(CKS) of cyclin-dependent kinase...	0.02	OrthoFinder output from all 47 species
Mp1g16700.1	No alias	scaffolding component CKS of cyclin-dependent kinase complex	0.03	OrthoFinder output from all 47 species
Tin_g18395	CKS1AT, CKS1	scaffold component *(CKS) of cyclin-dependent kinase...	0.03	OrthoFinder output from all 47 species
Zm00001e000375_P001	CKS1AT, CKS1,...	scaffolding component CKS of cyclin-dependent kinase complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEA	Interproscan
MF	GO:0019207	kinase regulator activity	None	Extended
MF	GO:0019887	protein kinase regulator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
CC	GO:0016272	prefoldin complex	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000789	Cyclin-dep_kinase_reg-sub	134	200

External Links

No external refs found!