1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_14707g0010

MA_14707g0010 (VAR2, FTSH2)


Aliases : VAR2, FTSH2

Description : component FtsH1|2|5|6|8 of FtsH plastidial protease complexes


Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_14707g0010

Target Alias Description ECC score Gene Family Method Actions
AT5G15250 ATFTSH6, FTSH6 FTSH protease 6 0.02 OrthoFinder output from all 47 species
Ala_g14174 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.01 OrthoFinder output from all 47 species
Als_g07586 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.01 OrthoFinder output from all 47 species
Aspi01Gene18386.t1 FTSH8, Aspi01Gene18386 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0187.g025114 No alias not classified & original description: CDS=1-1989 0.01 OrthoFinder output from all 47 species
Sam_g18762 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.01 OrthoFinder output from all 47 species
Sam_g37450 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.01 OrthoFinder output from all 47 species
Smo98264 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 391 522
IPR041569 AAA_lid_3 546 588
IPR000642 Peptidase_M41 605 793
No external refs found!