MA_136385g0010 (NCBP)

Aliases : NCBP

Description : Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica (sp|q10nq9|if4e3_orysj : 150.0)

Gene families : OG0007108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007108_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_136385g0010
Cluster	HCCA: Cluster_256

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00000241.158	NCBP	Eukaryotic translation initiation factor NCBP OS=Oryza...	0.01	OrthoFinder output from all 47 species
LOC_Os03g15590.1	NCBP, LOC_Os03g15590	RNA-cap-binding factor (4EHP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001040	TIF_eIF_4E	1	60

External Links

No external refs found!