MA_131880g0010 (CARB)

Aliases : CARB

Description : Carbamoyl-phosphate synthase large chain, chloroplastic OS=Arabidopsis thaliana (sp|q42601|carb_arath : 401.0)

Gene families : OG0004410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004410_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_131880g0010
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
Als_g39625	CARB	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0074.g037310	CARB	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Ceric.04G106800.1	CARB, Ceric.04G106800	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000157.99	CARB	Nucleotide metabolism.pyrimidines.ribonucleotide...	0.02	OrthoFinder output from all 47 species
Msp_g14214	CARB	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Spa_g52602	CARB	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Spa_g52603	CARB	large subunit of carbamoyl phosphate synthetase...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	1	200

External Links

No external refs found!