MA_117961g0010 (TCP-1, ATTCP-1)

Aliases : TCP-1, ATTCP-1

Description : T-complex protein 1 subunit alpha OS=Arabidopsis thaliana (sp|p28769|tcpa_arath : 238.0)

Gene families : OG0005794 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005794_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_117961g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00139270	TCP-1, ATTCP-1,...	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	OrthoFinder output from all 47 species
AT3G20050	TCP-1, ATTCP-1	T-complex protein 1 alpha subunit	0.06	OrthoFinder output from all 47 species
Aop_g15544	TCP-1, ATTCP-1	subunit alpha of CCT chaperonin folding complex *(CCT1)...	0.03	OrthoFinder output from all 47 species
Ceric.15G048500.1	TCP-1, ATTCP-1,...	subunit alpha of CCT chaperonin folding complex *(CCT1)...	0.02	OrthoFinder output from all 47 species
Cre10.g439100	TCP-1, ATTCP-1	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	OrthoFinder output from all 47 species
Dcu_g06362	TCP-1, ATTCP-1	subunit alpha of CCT chaperonin folding complex *(CCT1)...	0.03	OrthoFinder output from all 47 species
Gb_09465	TCP-1, ATTCP-1	CCT1 subunit alpha of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
LOC_Os04g46620.1	TCP-1, ATTCP-1,...	CCT1 subunit alpha of CCT chaperonin folding complex	0.07	OrthoFinder output from all 47 species
Lfl_g01691	TCP-1, ATTCP-1	subunit alpha of CCT chaperonin folding complex *(CCT1)...	0.02	OrthoFinder output from all 47 species
Mp7g01530.1	TCP-1, ATTCP-1	CCT1 subunit alpha of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species
Nbi_g06166	TCP-1, ATTCP-1	subunit alpha of CCT chaperonin folding complex *(CCT1)...	0.02	OrthoFinder output from all 47 species
Ore_g06833	TCP-1, ATTCP-1	subunit alpha of CCT chaperonin folding complex *(CCT1)...	0.03	OrthoFinder output from all 47 species
Sam_g28915	No alias	subunit alpha of CCT chaperonin folding complex *(CCT1)...	0.04	OrthoFinder output from all 47 species
Smo167342	TCP-1, ATTCP-1	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	OrthoFinder output from all 47 species
Solyc01g090750.3.1	TCP-1, ATTCP-1,...	CCT1 subunit alpha of CCT chaperonin folding complex	0.05	OrthoFinder output from all 47 species
Zm00001e016095_P001	TCP-1, ATTCP-1,...	CCT1 subunit alpha of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
Zm00001e023719_P001	TCP-1, ATTCP-1,...	CCT1 subunit alpha of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0018279	protein N-linked glycosylation via asparagine	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	1	142

External Links

No external refs found!

MA_117961g0010 (TCP-1, ATTCP-1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation