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  5. MA_10862g0010

MA_10862g0010


Description : Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana (sp|q94aj5|pglr5_arath : 144.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 31.1)


Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10862g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00250890 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AMTR_s00096p00099360 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AT1G60590 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G80170 No alias Pectin lyase-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT3G26610 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g112354 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01855 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12304 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44829.t1 Aspi01Gene44829 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46866.t1 Aspi01Gene46866 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014091 No alias EC_3.2 glycosylase & original description: CDS=583-3417 0.02 OrthoFinder output from all 47 species
Azfi_s0157.g053776 No alias EC_3.2 glycosylase & original description: CDS=175-1677 0.03 OrthoFinder output from all 47 species
Azfi_s0246.g060021 No alias EC_3.2 glycosylase & original description: CDS=1-1317 0.02 OrthoFinder output from all 47 species
Cba_g77261 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G025000.1 Ceric.20G025000 EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.38G004300.1 Ceric.38G004300 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g11602 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13455 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37611 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04883 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09828 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25659 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.03 OrthoFinder output from all 47 species
GSVIVT01013800001 No alias Cell wall.pectin.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01017644001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01028132001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01032117001 QRT2 Cell wall.pectin.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01032118001 QRT2 Cell wall.pectin.modification and... 0.03 OrthoFinder output from all 47 species
Gb_07779 No alias Polygalacturonase OS=Actinidia deliciosa... 0.08 OrthoFinder output from all 47 species
LOC_Os01g19170.1 LOC_Os01g19170 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g44970.1 LOC_Os01g44970 polygalacturonase (PGX1) 0.04 OrthoFinder output from all 47 species
LOC_Os05g46510.1 LOC_Os05g46510 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os08g23790.1 LOC_Os08g23790 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 OrthoFinder output from all 47 species
LOC_Os11g14400.1 LOC_Os11g14400 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species
Len_g23901 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g55532 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17901 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19271 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31860 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06863 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42249 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35940 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g64037 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15323 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Smo78038 No alias Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
Solyc04g025440.3.1 Solyc04g025440 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g041650.3.1 Solyc07g041650 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 OrthoFinder output from all 47 species
Solyc10g047570.2.1 Solyc10g047570 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.03 OrthoFinder output from all 47 species
Solyc12g009420.3.1 QRT2, Solyc12g009420 Polygalacturonase QRT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g30681 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54713 No alias polygalacturonase *(PGX1-like) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19992 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011814_P002 ADPG2, PGAZAT,... Polygalacturonase OS=Actinidia deliciosa... 0.02 OrthoFinder output from all 47 species
Zm00001e013553_P001 Zm00001e013553 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e026160_P001 Zm00001e026160 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e027720_P001 Zm00001e027720 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e032294_P001 Zm00001e032294 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e036989_P001 Zm00001e036989 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 143 219
IPR000743 Glyco_hydro_28 228 283
No external refs found!