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  5. MA_107720g0010

MA_107720g0010


Description : Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana (sp|o80871|p2c25_arath : 154.0)


Gene families : OG0001301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_107720g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00158970 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00110200 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00164770 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Adi_g079500 PP2C5, ATHPP2C5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14659 No alias clade B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07470 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28060 No alias clade B phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Als_g17266 No alias clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67179.t1 Aspi01Gene67179 clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G022700.1 Ceric.05G022700 clade B phosphatase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.05G022800.1 Ceric.05G022800 clade B phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g27780 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39980 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g11278 No alias clade B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024710001 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01036289001 No alias Probable protein phosphatase 2C 74 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Gb_40834 No alias clade B phosphatase 0.03 OrthoFinder output from all 47 species
LOC_Os03g18150.1 LOC_Os03g18150 Probable protein phosphatase 2C 32 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os11g13820.1 PP2C5, ATHPP2C5,... Probable protein phosphatase 2C 74 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os12g09640.1 LOC_Os12g09640 Probable protein phosphatase 2C 77 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g23780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12331 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
MA_1114215g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_1274g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_1556703g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_18130g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_185569g0010 No alias histone (H2B) 0.03 OrthoFinder output from all 47 species
MA_8110430g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_8880456g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9588978g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_9664807g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g11540.1 No alias clade B phosphatase 0.03 OrthoFinder output from all 47 species
Pir_g48663 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33412 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10523 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g052520.3.1 Solyc05g052520 Probable protein phosphatase 2C 30 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc06g007190.4.1 Solyc06g007190 Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g16375 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011044_P001 Zm00001e011044 Probable protein phosphatase 2C 74 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 141 269
No external refs found!