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  5. MA_106528g0010

MA_106528g0010


Description : Polygalacturonase At1g48100 OS=Arabidopsis thaliana (sp|q949z1|pglr4_arath : 99.8) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 63.7)


Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_106528g0010

Target Alias Description ECC score Gene Family Method Actions
AT5G14650 No alias Pectin lyase-like superfamily protein 0.08 OrthoFinder output from all 47 species
Ceric.20G025000.1 Ceric.20G025000 EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g13455 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g15391 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g22868 No alias polygalacturonase *(PGX1-like) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01013800001 No alias Cell wall.pectin.modification and... 0.01 OrthoFinder output from all 47 species
GSVIVT01032447001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033362001 ADPG2, PGAZAT Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01033364001 ADPG2, PGAZAT Cell wall.pectin.modification and... 0.01 OrthoFinder output from all 47 species
LOC_Os03g59330.1 ADPG2, PGAZAT,... polygalacturonase (QRT2) 0.04 OrthoFinder output from all 47 species
MA_10232053g0010 No alias Polygalacturonase OS=Cryptomeria japonica... 0.01 OrthoFinder output from all 47 species
MA_13282g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.02 OrthoFinder output from all 47 species
Solyc10g047570.2.1 Solyc10g047570 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 OrthoFinder output from all 47 species
Solyc10g047590.3.1 Solyc10g047590 Polygalacturonase OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 3 83
No external refs found!