MA_10436969g0010

Description : ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana (sp|f4jfj3|y3206_arath : 271.0)

Gene families : OG0004721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004721_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10436969g0010

Target	Alias	Description	ECC score	Gene Family Method
Aev_g07951	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g17279	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g18567	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.13G022800.1	Ceric.13G022800	not classified & original description: pacid=50636376...	0.02	OrthoFinder output from all 47 species
Dde_g04918	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g08581	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_38755	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.05	OrthoFinder output from all 47 species
Lfl_g05693	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g07230.1	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.02	OrthoFinder output from all 47 species
Pir_g10408	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo77276	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.02	OrthoFinder output from all 47 species
Spa_g26930	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0017038	protein import	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	2	108

External Links

No external refs found!