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Aliases : UPL6
Description : E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana (sp|q8rwb8|upl6_arath : 196.0)
Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10436808g0010 | |
| Cluster | HCCA: Cluster_241 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G17205 | UPL6 | ubiquitin protein ligase 6 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G53090 | UPL7 | ubiquitin-protein ligase 7 | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g04174 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62754 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g15928 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g20441 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g10603 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G020700.1 | UPL6, Ceric.05G020700 | E3 ubiquitin ligase *(UPL6) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z062300.1 | UPL7, Ceric.1Z062300 | E3 ubiquitin ligase *(UPL6) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02012 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g10609 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01034942001 | UPL6 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04194 | UPL6 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_22218 | UPL7 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g06690.1 | UPL6, LOC_Os05g06690 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g08600 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g18370.1 | UPL6 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g02100.1 | UPL7 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g17334 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39628 | No alias | E3 ubiquitin ligase *(UPL6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo443962 | UPL6 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g057900.3.1 | UPL6, Solyc01g057900 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04573 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13531 | UPL6 | E3 ubiquiTin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039899_P001 | UPL6, Zm00001e039899 | monomeric E3 ubiquitin ligase (HECT) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016197 | endosomal transport | IEP | HCCA |
| BP | GO:0016482 | cytosolic transport | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| CC | GO:0030906 | retromer, cargo-selective complex | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |